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2,085 Data sources

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  • ViruSurf is a large public database of viral sequences and integrated and curated metadata from heterogeneous sources (RefSeq, GenBank, COG-UK and NMDC); it also exposes computed nucleotide and amino acid variants, called from original sequences. A GISAID-specific ViruSurf database offers a subset of these functionalities. Given the current pandemic outbreak, SARS-CoV-2 data are collected from the four sources; but ViruSurf contains other virus species harmful to humans, including SARS-CoV, MERS-CoV, Ebola, and Dengue. The database is centered on sequences, described from their biological, technological, and organizational dimensions. In addition, the analytical dimension characterizes the sequence in terms of its annotations and variants. The web interface enables expressing complex search queries in a simple way; arbitrary search queries can freely combine conditions on attributes from the four dimensions, extracting the resulting sequences. Several example queries on the database confirm and possibly improve results from recent research papers; results can be recomputed over time and upon selected populations. Effective search over large and curated sequence data may enable faster responses to future threats that could arise from new viruses.

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  • The Chinese National Artic and Antarctic Data centre collects, analyses and preserves datasets from the polar environment.

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  • The European Database of Seismogenic Faults (EDSF) is a repository of faults that are deemed to be capable of generating earthquakes of magnitude equal to or larger than 5.5, and aims to ensure homogeneous input for use in ground-shaking hazard assessment in the Euro-Mediterranean area.

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  • ScienceDB (Science Data Bank) is an open generalist data repository developed and maintained by the CNIC. It promotes the publication and reuse of scientific data. Researchers and journal publishers can use it to store, manage and share science data.

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  • This site provides access to the outputs of the doctoral students of this institution. Users may set up Atom and RSS feeds to be alerted to new content. The interface is available in Italian.

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2,085 Data sources
  • more_vert
  • ViruSurf is a large public database of viral sequences and integrated and curated metadata from heterogeneous sources (RefSeq, GenBank, COG-UK and NMDC); it also exposes computed nucleotide and amino acid variants, called from original sequences. A GISAID-specific ViruSurf database offers a subset of these functionalities. Given the current pandemic outbreak, SARS-CoV-2 data are collected from the four sources; but ViruSurf contains other virus species harmful to humans, including SARS-CoV, MERS-CoV, Ebola, and Dengue. The database is centered on sequences, described from their biological, technological, and organizational dimensions. In addition, the analytical dimension characterizes the sequence in terms of its annotations and variants. The web interface enables expressing complex search queries in a simple way; arbitrary search queries can freely combine conditions on attributes from the four dimensions, extracting the resulting sequences. Several example queries on the database confirm and possibly improve results from recent research papers; results can be recomputed over time and upon selected populations. Effective search over large and curated sequence data may enable faster responses to future threats that could arise from new viruses.

    more_vert
  • more_vert
  • more_vert
  • The Chinese National Artic and Antarctic Data centre collects, analyses and preserves datasets from the polar environment.

    more_vert
  • more_vert
  • The European Database of Seismogenic Faults (EDSF) is a repository of faults that are deemed to be capable of generating earthquakes of magnitude equal to or larger than 5.5, and aims to ensure homogeneous input for use in ground-shaking hazard assessment in the Euro-Mediterranean area.

    more_vert
  • ScienceDB (Science Data Bank) is an open generalist data repository developed and maintained by the CNIC. It promotes the publication and reuse of scientific data. Researchers and journal publishers can use it to store, manage and share science data.

    more_vert
  • more_vert
  • This site provides access to the outputs of the doctoral students of this institution. Users may set up Atom and RSS feeds to be alerted to new content. The interface is available in Italian.

    more_vert
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  • 10
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