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Functional Coverage of the Proteome
Data Repository Spain Compatibility:Not yet registeredPartners:PRBB Life Science, Proteomics, Annotation
PRBB
doi: 10.25504/fairsharing.77d397
doi: 10.25504/fairsharing.77d397
FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.
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Institutional Repository Spain Compatibility:Not yet registeredPartners:Fundación Juan March

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Zoological Institute
Data Repository United States, China (People's Republic of) Compatibility:Not yet registeredPartners:USDA, NIFA, NAGRP, HZAU, ISU Life Sciences, Zoology, Animal Genetics, Cell and Developmental Biology
USDA, NIFA,
NAGRP,
HZAU,
ISU
doi: 10.25504/fairsharing.ho0dyr
re3data: r3d100010744
doi: 10.25504/fairsharing.ho0dyr
re3data: r3d100010744
altitude; temperature
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Academica-e
Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Universidad Publica De Navarra Agriculture, Food and Veterinary, Technology General, Computers and IT
Universidad Publica De Navarra
OAI-PMH URL: https://academica-e.unavarra.es/server/oai/openaire4
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University of Macau Scholars Page

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:澳門大學 (Universidade de Macau)

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Repositorium.Hamburg - Wissenschaftliche Publikationen im Open Access
Institutional Repository Germany Compatibility:Not yet registeredPartners:Staats- und Universitätsbibliothek Hamburg
Staats- und Universitätsbibliothek Hamburg
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Protist Ribosomal Reference Database
Data Repository France, Spain Compatibility:Not yet registeredPartners:CNRS, IBE Taxonomy, Genetics, Taxonomic classification
CNRS,
IBE
doi: 10.25504/fairsharing.28df52
doi: 10.25504/fairsharing.28df52
The PR2 reference sequence database began as part of the BioMarks project from previous work in the Plankton Group of the Station Biologique of Roscoff. It aims to provide a reference database of carefully annotated 18S rRNA sequences using nine unique taxonomic fields (from domain to species). At present, it contains over 240,000 sequences. Although it focuses on protists, it also contains sequences from metazoa, fungi and plants as well a limited set of 16S sequences from plastids and bacteria. Several metadata fields are available for many sequences, including geo-localisation, whether it originates from a culture or a natural sample, and host type. The annotation of PR2 is performed by experts in each of the taxonomic groups.
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IOW Data Portal
Data Repository Germany Compatibility:Not yet registeredPartners:IOW Environmental Science, Geography, Geology
IOW
doi: 10.25504/fairsharing.6738fd
re3data: r3d100012937
doi: 10.25504/fairsharing.6738fd
re3data: r3d100012937
The IOW Data Portal was designed for the particular requirements of the Leibniz Institute for Baltic Sea Research (IOW). It is aimed at the management of historical and recent measurement of the IOW (to some extend of other data, too) and to provide them in a user-friendly way via the research tool ODIN (Oceanographic Database research with Interactive Navigation).
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UPCommons. Portal del coneixement obert de la UPC
Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Universitat Polite`cnica de Catalunya Science General, Technology General
Universitat Polite`cnica de Catalunya
OAI-PMH URL: https://upcommons.upc.edu/oai/openaire
This site is a university repository providing access to the publication output of the institution. The contents of the repository reflect the interests of the institution and are heavily weighted towards applied sciences and technologies. The site offers in addition to the standard searching options, a concept search construction tool. The site interface is in Catalan, Spanish and English.
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4,530 Data sources

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eDiss

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Functional Coverage of the Proteome
Data Repository Spain Compatibility:Not yet registeredPartners:PRBB Life Science, Proteomics, Annotation
PRBB
doi: 10.25504/fairsharing.77d397
doi: 10.25504/fairsharing.77d397
FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.
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CEACS Repository

Institutional Repository Spain Compatibility:Not yet registeredPartners:Fundación Juan March

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Zoological Institute
Data Repository United States, China (People's Republic of) Compatibility:Not yet registeredPartners:USDA, NIFA, NAGRP, HZAU, ISU Life Sciences, Zoology, Animal Genetics, Cell and Developmental Biology
USDA, NIFA,
NAGRP,
HZAU,
ISU
doi: 10.25504/fairsharing.ho0dyr
re3data: r3d100010744
doi: 10.25504/fairsharing.ho0dyr
re3data: r3d100010744
altitude; temperature
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Academica-e
Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Universidad Publica De Navarra Agriculture, Food and Veterinary, Technology General, Computers and IT
Universidad Publica De Navarra
OAI-PMH URL: https://academica-e.unavarra.es/server/oai/openaire4
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University of Macau Scholars Page

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:澳門大學 (Universidade de Macau)

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Repositorium.Hamburg - Wissenschaftliche Publikationen im Open Access
Institutional Repository Germany Compatibility:Not yet registeredPartners:Staats- und Universitätsbibliothek Hamburg
Staats- und Universitätsbibliothek Hamburg
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Protist Ribosomal Reference Database
Data Repository France, Spain Compatibility:Not yet registeredPartners:CNRS, IBE Taxonomy, Genetics, Taxonomic classification
CNRS,
IBE
doi: 10.25504/fairsharing.28df52
doi: 10.25504/fairsharing.28df52
The PR2 reference sequence database began as part of the BioMarks project from previous work in the Plankton Group of the Station Biologique of Roscoff. It aims to provide a reference database of carefully annotated 18S rRNA sequences using nine unique taxonomic fields (from domain to species). At present, it contains over 240,000 sequences. Although it focuses on protists, it also contains sequences from metazoa, fungi and plants as well a limited set of 16S sequences from plastids and bacteria. Several metadata fields are available for many sequences, including geo-localisation, whether it originates from a culture or a natural sample, and host type. The annotation of PR2 is performed by experts in each of the taxonomic groups.
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IOW Data Portal
Data Repository Germany Compatibility:Not yet registeredPartners:IOW Environmental Science, Geography, Geology
IOW
doi: 10.25504/fairsharing.6738fd
re3data: r3d100012937
doi: 10.25504/fairsharing.6738fd
re3data: r3d100012937
The IOW Data Portal was designed for the particular requirements of the Leibniz Institute for Baltic Sea Research (IOW). It is aimed at the management of historical and recent measurement of the IOW (to some extend of other data, too) and to provide them in a user-friendly way via the research tool ODIN (Oceanographic Database research with Interactive Navigation).
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UPCommons. Portal del coneixement obert de la UPC
Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Universitat Polite`cnica de Catalunya Science General, Technology General
Universitat Polite`cnica de Catalunya
OAI-PMH URL: https://upcommons.upc.edu/oai/openaire
This site is a university repository providing access to the publication output of the institution. The contents of the repository reflect the interests of the institution and are heavily weighted towards applied sciences and technologies. The site offers in addition to the standard searching options, a concept search construction tool. The site interface is in Catalan, Spanish and English.
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UPCommons. Portal del coneixement obert de la UPC

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Functional Coverage of the Proteome

CEACS Repository

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