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  • This site provides access to the output of the institution. Users may set up an RSS feed to be alerted to new content. Some items are not available as full-text. The interface is available in French and English. Additional services such as exporting of publications lists are available. Some items are linked to their PubMed records

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  • ViruSurf is a large public database of viral sequences and integrated and curated metadata from heterogeneous sources (RefSeq, GenBank, COG-UK and NMDC); it also exposes computed nucleotide and amino acid variants, called from original sequences. A GISAID-specific ViruSurf database offers a subset of these functionalities. Given the current pandemic outbreak, SARS-CoV-2 data are collected from the four sources; but ViruSurf contains other virus species harmful to humans, including SARS-CoV, MERS-CoV, Ebola, and Dengue. The database is centered on sequences, described from their biological, technological, and organizational dimensions. In addition, the analytical dimension characterizes the sequence in terms of its annotations and variants. The web interface enables expressing complex search queries in a simple way; arbitrary search queries can freely combine conditions on attributes from the four dimensions, extracting the resulting sequences. Several example queries on the database confirm and possibly improve results from recent research papers; results can be recomputed over time and upon selected populations. Effective search over large and curated sequence data may enable faster responses to future threats that could arise from new viruses.

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  • The European Database of Seismogenic Faults (EDSF) is a repository of faults that are deemed to be capable of generating earthquakes of magnitude equal to or larger than 5.5, and aims to ensure homogeneous input for use in ground-shaking hazard assessment in the Euro-Mediterranean area.

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  • The Ocean Biodiversity (formerly Biogeographic) information System (OBIS) seeks to absorb, integrate, and assess isolated datasets into a larger, more comprehensive pictures of life in our oceans. The system hopes to stimulate research about our oceans to generate new hypotheses concerning evolutionary processes, species distributions, and roles of organisms in marine systems on a global scale. The abstract maps that OBIS generates are maps that contribute to the ‘big picture’ of our oceans: a comprehensive, collaborative, world-wide view of our oceans. OBIS provides a portal or gateway to many datasets containing information on where and when marine species have been recorded. The datasets are integrated so you can search them all seamlessly by species name, higher taxonomic level, geographic area, depth, and time; and then map and find environmental data related to the locations.

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1,810 Data sources
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  • This site provides access to the output of the institution. Users may set up an RSS feed to be alerted to new content. Some items are not available as full-text. The interface is available in French and English. Additional services such as exporting of publications lists are available. Some items are linked to their PubMed records

    more_vert
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  • ViruSurf is a large public database of viral sequences and integrated and curated metadata from heterogeneous sources (RefSeq, GenBank, COG-UK and NMDC); it also exposes computed nucleotide and amino acid variants, called from original sequences. A GISAID-specific ViruSurf database offers a subset of these functionalities. Given the current pandemic outbreak, SARS-CoV-2 data are collected from the four sources; but ViruSurf contains other virus species harmful to humans, including SARS-CoV, MERS-CoV, Ebola, and Dengue. The database is centered on sequences, described from their biological, technological, and organizational dimensions. In addition, the analytical dimension characterizes the sequence in terms of its annotations and variants. The web interface enables expressing complex search queries in a simple way; arbitrary search queries can freely combine conditions on attributes from the four dimensions, extracting the resulting sequences. Several example queries on the database confirm and possibly improve results from recent research papers; results can be recomputed over time and upon selected populations. Effective search over large and curated sequence data may enable faster responses to future threats that could arise from new viruses.

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  • The European Database of Seismogenic Faults (EDSF) is a repository of faults that are deemed to be capable of generating earthquakes of magnitude equal to or larger than 5.5, and aims to ensure homogeneous input for use in ground-shaking hazard assessment in the Euro-Mediterranean area.

    more_vert
  • more_vert
  • The Ocean Biodiversity (formerly Biogeographic) information System (OBIS) seeks to absorb, integrate, and assess isolated datasets into a larger, more comprehensive pictures of life in our oceans. The system hopes to stimulate research about our oceans to generate new hypotheses concerning evolutionary processes, species distributions, and roles of organisms in marine systems on a global scale. The abstract maps that OBIS generates are maps that contribute to the ‘big picture’ of our oceans: a comprehensive, collaborative, world-wide view of our oceans. OBIS provides a portal or gateway to many datasets containing information on where and when marine species have been recorded. The datasets are integrated so you can search them all seamlessly by species name, higher taxonomic level, geographic area, depth, and time; and then map and find environmental data related to the locations.

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