3,233 Data sources
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- Data Repository Italy Compatibility:Not yet registeredPartners:Polytechnic University of Milan Life Science, Virology, Data ManagementPolytechnic University of Milan
ViruSurf is a large public database of viral sequences and integrated and curated metadata from heterogeneous sources (RefSeq, GenBank, COG-UK and NMDC); it also exposes computed nucleotide and amino acid variants, called from original sequences. A GISAID-specific ViruSurf database offers a subset of these functionalities. Given the current pandemic outbreak, SARS-CoV-2 data are collected from the four sources; but ViruSurf contains other virus species harmful to humans, including SARS-CoV, MERS-CoV, Ebola, and Dengue. The database is centered on sequences, described from their biological, technological, and organizational dimensions. In addition, the analytical dimension characterizes the sequence in terms of its annotations and variants. The web interface enables expressing complex search queries in a simple way; arbitrary search queries can freely combine conditions on attributes from the four dimensions, extracting the resulting sequences. Several example queries on the database confirm and possibly improve results from recent research papers; results can be recomputed over time and upon selected populations. Effective search over large and curated sequence data may enable faster responses to future threats that could arise from new viruses.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.vx5oev&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.vx5oev&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:collected from a compatible aggregatorPartners:EUR MultidisciplinaryEUR
This is an institutional repository for Erasmus Universiteit Rotterdam, providing access to the research output of the institution. The interface is available in English. Approximately half of items are not available as open access texts.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::9c3b1830513cc3b8fc4b76635d32e692&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::9c3b1830513cc3b8fc4b76635d32e692&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository France, Germany Compatibility:Not yet registeredPartners:ICSU, GAW, DLR, DFD Natural Sciences, Atmospheric Science and Oceanography, Atmospheric ScienceICSU,GAW,DLR,DFD
re3data: r3d100010156
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100010156&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100010156&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:Not yet registeredPartners:University of GroningenUniversity of GroningenAll Research products
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This site provides access to the research output of the institution. The interface is available in German and English.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::91f5738a827405b0f0bd80af1b7e386c&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::91f5738a827405b0f0bd80af1b7e386c&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:collected from a compatible aggregatorPartners:Netherlands Institute for Transport Policy Analysis (KiM) {NULL}Netherlands Institute for Transport Policy Analysis (KiM)All Research products
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This site is a university repository providing access to the publication output of the institution, which in this case is concerned with matters of enterprise and business. The site interface is available in Italian and has RSS feeds to alert users of new content.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::1385974ed5904a438616ff7bdb3f7439&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::1385974ed5904a438616ff7bdb3f7439&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:Bologna Biocomputing Group, University of Bologna, Italy Human Genetics, Pathology, Rare DisorderBologna Biocomputing Group, University of Bologna, Italy
DAR is a database mapping disease-associated enzyme into Reactome pathways.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.9ac5e5&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.9ac5e5&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Italy Compatibility:Not yet registeredPartners:AURAURAll Research products
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3,233 Data sources
- Data Repository Italy Compatibility:Not yet registeredPartners:Polytechnic University of Milan Life Science, Virology, Data ManagementPolytechnic University of Milan
ViruSurf is a large public database of viral sequences and integrated and curated metadata from heterogeneous sources (RefSeq, GenBank, COG-UK and NMDC); it also exposes computed nucleotide and amino acid variants, called from original sequences. A GISAID-specific ViruSurf database offers a subset of these functionalities. Given the current pandemic outbreak, SARS-CoV-2 data are collected from the four sources; but ViruSurf contains other virus species harmful to humans, including SARS-CoV, MERS-CoV, Ebola, and Dengue. The database is centered on sequences, described from their biological, technological, and organizational dimensions. In addition, the analytical dimension characterizes the sequence in terms of its annotations and variants. The web interface enables expressing complex search queries in a simple way; arbitrary search queries can freely combine conditions on attributes from the four dimensions, extracting the resulting sequences. Several example queries on the database confirm and possibly improve results from recent research papers; results can be recomputed over time and upon selected populations. Effective search over large and curated sequence data may enable faster responses to future threats that could arise from new viruses.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.vx5oev&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.vx5oev&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:collected from a compatible aggregatorPartners:EUR MultidisciplinaryEUR
This is an institutional repository for Erasmus Universiteit Rotterdam, providing access to the research output of the institution. The interface is available in English. Approximately half of items are not available as open access texts.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::9c3b1830513cc3b8fc4b76635d32e692&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::9c3b1830513cc3b8fc4b76635d32e692&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository France, Germany Compatibility:Not yet registeredPartners:ICSU, GAW, DLR, DFD Natural Sciences, Atmospheric Science and Oceanography, Atmospheric ScienceICSU,GAW,DLR,DFD
re3data: r3d100010156
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100010156&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100010156&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:Not yet registeredPartners:University of GroningenUniversity of GroningenAll Research products
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This site provides access to the research output of the institution. The interface is available in German and English.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::91f5738a827405b0f0bd80af1b7e386c&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::91f5738a827405b0f0bd80af1b7e386c&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:collected from a compatible aggregatorPartners:Netherlands Institute for Transport Policy Analysis (KiM) {NULL}Netherlands Institute for Transport Policy Analysis (KiM)All Research products
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This site is a university repository providing access to the publication output of the institution, which in this case is concerned with matters of enterprise and business. The site interface is available in Italian and has RSS feeds to alert users of new content.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::1385974ed5904a438616ff7bdb3f7439&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::1385974ed5904a438616ff7bdb3f7439&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:Bologna Biocomputing Group, University of Bologna, Italy Human Genetics, Pathology, Rare DisorderBologna Biocomputing Group, University of Bologna, Italy
DAR is a database mapping disease-associated enzyme into Reactome pathways.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.9ac5e5&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.9ac5e5&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Italy Compatibility:Not yet registeredPartners:AURAURAll Research products
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